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Dalpathado, Dilusha S.; Chang, Qing; Burkett, Colleen M.; Bandu, Mary L.; Desaire, Heather. Application of the statistical test of equivalent pathways (STEP) method to the triple quadrupole mass spectrometer. Rapid Communications in Mass Spectrometry (2007), 21(20), 3365-3372.
Wang, A. , Zeng, Y., Han, H., Weeratunga, S., Morgan, B. Moënne-Loccoz, P., Schönbrunn, E., and Rivera, M. J., Biochemical and Structural Characterization of Pseudomonas aeruginosa Bfd and FPR: Ferredoxin NADP+ Reductase and Not Ferredoxin Is the Redox Partner of Heme Oxygenase under Iron-Starvation Conditions, Biochemistry (2007), 46, 12198-12211.
Johnson, M. A., Villanueva, M., Haynes, C. L., Seipel, A. T, Buhler, L. A., and Wightman, R. M., Catecholamine exocytosis is diminished in the R6/2 mouse model of Huntington’s disease, J. Neurochem., 2007, 103(5), 2102-2110.
Dickenson, Nicholas E.; Erickson, Elizabeth S.; Mooren, Olivia L.; Dunn, Robert C.. Characterization of power induced heating and damage in fiber optic probes for near-field scanning optical microscopy. Review of Scientific Instruments (2007), 78(5), 053712/1-053712/6.
Arnett, Stacy D.; Lunte, Craig E.. Enhanced pH-mediated stacking of anions for CE incorporating a dynamic pH junction. Electrophoresis (2007), 28(20), 3786-3793.
Cooper, Joshua D.; Heppert, Kathleen E.; Davies, Malonne I.; Lunte, Susan M.. Evaluation of an osmotic pump for microdialysis sampling in an awake and untethered rat. Journal of Neuroscience Methods (2007), 160(2), 269-275.
Mitchell, Jennifer L.; Trible, Ronald P.; Emert-Sedlak, Lori A.; Weis, David D.; Lerner, Edwina C.; Applen, Jeremy J.; Sefton, Bartholomew M.; Smithgall, Thomas E.; Engen, John R. Functional Characterization and Conformational Analysis of the Herpesvirus saimiri Tip-C484 Protein. Journal of Molecular Biology (2007), 366(4), 1282-1293.
Go, Eden P.; Rebecchi, Kathryn R.; Dalpathado, Dilusha S.; Bandu, Mary L.; Zhang, Ying; Desaire, Heather. GlycoPep DB: A Tool for Glycopeptide Analysis Using a "Smart Search". Analytical Chemistry (2007), 79(4), 1708-1713.
Rodriguez, J.C., Zeng, Y., Wilks, A., and Rivera, M., The Hydrogen-Bonding Network in Heme Oxygenase Also Functions as a Modulator of Enzyme Dynamics: Chaotic Motions upon Disrupting the H-Bond Network in Heme Oxygenase from Pseudomonas aeruginosa, Journal Am. Chem. Soc. (2007), 129, 11730-11742.
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Crick, Eric W.; Osorio, Ivan; Bhavaraju, Naresh C.; Linz, Thomas H.; Lunte, Craig E.. An investigation into the pharmacokinetics of 3-mercaptopropionic acid and development of a steady-state chemical seizure model using in vivo microdialysis and electrophysiological monitoring. Epilepsy Research (2007), 74(2-3), 116-125.
Chappa, Arvind K.; Cooper, Joshua D.; Audus, Kenneth L.; Lunte, Susan M.. Investigation of the metabolism of substance P at the blood-brain barrier using LC-MS/MS. Journal of Pharmaceutical and Biomedical Analysis (2007), 43(4), 1409-1415.
Slaughter, Brian D.; Bieber Urbauer, Ramona J.; Urbauer, Jeffrey L.; Johnson, Carey K.. Mechanism of Calmodulin Recognition of the Binding Domain of Isoform 1b of the Plasma Membrane Ca2+-ATPase: Kinetic Pathway and Effects of Methionine Oxidation. Biochemistry (2007), 46(13), 4045-4054.
He, Feng; Samra, Hardeep S.; Tucker, Ward C.; Mayans, David R.; Hoang, Etter; Gromet-Elhanan, Zippora; Berrie, Cindy L.; Richter, Mark L. Mutations within the C-Terminus of the Subunit of the Photosynthetic F1-ATPase Activate MgATP Hydrolysis and Attenuate the Stimulatory Oxyanion Effect. Biochemistry (2007), 46(9), 2411-2418.
Frankenfeld, Celeste; Lunte, Susan. Pharmaceutical analysis using bio-MEMS. Bio-MEMS (2007), 443-465.
Weis, David D.; Kaveti, Suma; Wu, Yan; Engen, John R. Probing protein interactions using hydrogen-deuterium exchange mass spectrometry. Mass Spectrometry of Protein Interactions (2007), 45-61.
Pennington, Justin P.; Schoneich, Christian; Stobaugh, John F.. Selective fluorogenic derivatization with isotopic coding of catechols and 2-amino phenols with benzylamine: a chemical basis for the relative determination of 3-hydroxy-tyrosine and 3-nitro-tyrosine peptides. Chromatographia (2007), 66(9/10), 649-659.
Irungu, Janet; Go, Eden P.; Dalpathado, Dilusha S.; Desaire, Heather. Simplification of Mass Spectral Analysis of Acidic Glycopeptides Using GlycoPep ID. Analytical Chemistry (2007), 79(8), 3065-3074.
Priddy, Timothy S.; Price, E. Shane; Johnson, Carey K.; Carlson, Gerald M. Single molecule analyses of the conformational substates of calmodulin bound to the phosphorylase kinase complex. Protein Science (2007), 16(6), 1017-1023.
Unruh, Jay R.; Liyanage, Mangala Roshan; Johnson, Carey K.. Tyrosyl Rotamer Interconversion Rates and the Fluorescence Decays of N-Acetyltyrosinamide and Short Tyrosyl Peptides. Journal of Physical Chemistry B (2007), 111(19), 5494-5502.
Dickenson, Nicholas E.; Moore, David; Suprenant, Kathy A.; Dunn, Robert C.. Vault ribonucleoprotein particles and the central mass of the nuclear pore complex. Photochemistry and Photobiology (2007), 83(3), 686-691.
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Weis, David D.; Kjellen, Peter; Sefton, Bartholomew M.; Engen, John R. Altered dynamics in Lck SH3 upon binding to the LBD1 domain of Herpesvirus saimiri Tip. Protein Science (2006), 15(10), 2402-2410.
Krisko, Ryan M.; McLaughlin, Kieran; Koenigbauer, Michael J.; Lunte, Craig E.. Application of a column selection system and DryLab software for high-performance liquid chromatography method development. Journal of Chromatography, A (2006), 1122(1-2), 186-193.
Rodriguez, J. C., Wilks, A., & Rivera, M., Backbone NMR Assignments and H/D Exchange Studies on the Ferric Azide- and Cyanide-Inhibited Forms of Pseudomonas aeruginosa Heme Oxygenase, Biochemistry , (2006), 45(14), 4578-4592
Johnson, Carey K.. Calmodulin, conformational states, and calcium signaling. A single-molecule perspective. Biochemistry (2006), 45(48), 14233-14246.
Chappa, Arvind K.; Audus, Kenneth L.; Lunte, Susan M.. Characteristics of Substance P Transport Across the Blood-Brain Barrier. Pharmaceutical Research (2006), 23(6), 1201-1208.
Bandu, Mary L.; Grubbs, Thomas; Kater, Marcus; Desaire, Heather. Collision induced dissociation of alpha hydroxy acids: Evidence of an ion-neutral complex intermediate. International Journal of Mass Spectrometry (2006), 251(1), 40-46.
Dalpathado, Dilusha S.; Irungu, Janet; Go, Eden P.; Butnev, Vladimir Y.; Norton, Katie; Bousfield, George R.; Desaire, Heather. Comparative Glycomics of the Glycoprotein Follicle Stimulating Hormone: Glycopeptide Analysis of Isolates from Two Mammalian Species. Biochemistry (2006), 45(28), 8665-8673.
Kamerzell, Tim J.; Unruh, Jay R.; Johnson, Carey K.; Middaugh, C. Russell. Conformational Flexibility, Hydration and State Parameter Fluctuations of Fibroblast Growth Factor-10: Effects of Ligand Binding. Biochemistry (2006), 45(51), 15288-15300.
Mora, Johanna R.; Knoll, Joan H. M.; Rogan, Peter K.; Getts, Robert C.; Wilson, George S.. Dendrimer FISH detection of single-copy intervals in acute promyelocytic leukemia. Molecular and Cellular Probes (2006), 20(2), 114-120.
Li, Michelle W.; Huynh, Bryan H.; Hulvey, Matthew K.; Lunte, Susan M.; Martin, R. Scott. Design and Characterization of Poly(dimethylsiloxane)-Based Valves for Interfacing Continuous-Flow Sampling to Microchip Electrophoresis. Analytical Chemistry (2006), 78(4), 1042-1051.
Pasas, Stephanie; Fogarty, Barbara; Huynh, Bryan; Lacher, Nathan; Carlson, Brian; Martin, Scott; Vandaveer, Walter, IV; Lunte, Susan. Detection on microchips: principles, challenges, hyphenation, and integration. Separation Methods in Microanalytical Systems (2006), 433-497.
Takaoka, Hiroki; Yasuzawa, Mikito; Shimizu, Toshiyasu; Imai, Shinji; Gifford, Raeann; Wilson, George S.. Development of flexible glucose sensor for in vivo measurement. Chemical Sensors (2006), 22(Suppl. A), 112-114.
Moriyama, Kenji; Takaoka, Hiroki; Yasuzawa, Mikito; Wilson, George S.. Development of precise enzyme-localizing technique for multi-channel sensor fabrication. Chemical Sensors (2006), 22(Suppl. B), 10-12.
Yasuzawa, Mikito; Furukawa, Shinya; Takaoka, Hiroki; Gifford, Raeann; Wilson, George S.. Development of a multichannel biosensor for in vivo measurement. Chemical Sensors (2006), 22(Suppl. A), 115-117.
Zhang, Ying; Jiang, Hui; Go, Eden P.; Desaire, Heather. Distinguishing Phosphorylation and Sulfation in Carbohydrates and Glycoproteins Using Ion-Pairing and Mass Spectrometry. Journal of the American Society for Mass Spectrometry (2006), 17(9), 1282-1288.
Johnson, M. A., Rajan, V., Miller, C. E., and Wightman, R. M. Dopamine Release is Severely Compromised in the R6/2 Mouse Model of Huntington’s Disease, J. Neurochem., 2006, 97(3), 737-746.
Wang, Mengmeng; Unruh, Jay R.; Johnson, Carey K.; Kuczera, Krzysztof; Schowen, Richard L.; Borchardt, Ronald T. Effects of Ligand Binding and Oxidation on Hinge-Bending Motions in S-Adenosyl-L-homocysteine Hydrolase. Biochemistry (2006), 45(25), 7778-7786.
Jay R. Unruh, E. Shane Price, Roque Gagliano Molla, Rongqing Hui, and Carey K. Johnson, Evaluation of a Femtosecond Fiber Laser for Two-Photon Fluorescence Correlation Spectroscopy, Microscopy Research and Technique (2006) 69 891-893.
Carey K. Johnson, Brian D. Slaughter, Jay R. Unruh, and E. Shane Price, Fluorescence Probes of Protein Dynamics and Conformations in Freely Diffusing Molecules. Single-Molecule Resonance Energy Transfer and Time-Resolved Fluorescence Methods, in Reviews in Fluorescence, Vol. 3, C. D. Geddes and J. R. Lakowicz, eds., invited book chapter, (Springer, New York, 2006) 239-259.
Vitharana, Samadhi N.; Wilson, George S.. Fractionation of chromosome 15 with an affinity-based approach using magnetic beads. Genomics (2006), 87(1), 158-164.
Weis, David D.; Wales, Thomas E.; Engen, John R.; Hotchko, Matthew; Ten Eyck, Lynn F. Identification and Characterization of EX1 Kinetics in H/D Exchange Mass Spectrometry by Peak Width Analysis. Journal of the American Society for Mass Spectrometry (2006), 17(11), 1498-1509.
Yi, Lin; Dratter, Joe; Wang, Chao; Tunge, Jon A.; Desaire, Heather. Identification of sulfation sites of metabolites and prediction of the compounds' biological effects. Analytical and Bioanalytical Chemistry (2006), 386(3), 666-674.
Cheng, Q., Benson, D. R., Rivera, M., & Kuczera, K., Influence of point mutations on the flexibility of cytochrome b5: molecular dynamics simulations of holoproteins, Biopolymers, (2006), 83(3), 297-312.
DuBose, David L.; Robinson, Randall E.; Holovics, Thomas C.; Moody, David R.; Weintrob, Edward C.; Berrie, Cindy L.; Barybin, Mikhail V. Interaction of Mono- and Diisocyanoazulenes with Gold Surfaces: First Examples of Self-Assembled Monolayer Films Involving Azulenic Scaffolds. Langmuir (2006), 22(10), 4599-4606.
Irungu, Janet; Dalpathado, Dilusha S.; Go, Eden P.; Jiang, Hui; Ha, Hy-Vy; Bousfield, George R.; Desaire, Heather. Method for Characterizing Sulfated Glycoproteins in a Glycosylation Site-Specific Fashion, Using Ion Pairing and Tandem Mass Spectrometry. Analytical Chemistry (2006), 78(4), 1181-1190.
Fogarty, Barbara A.; Lacher, Nathan A.; Lunte, Susan M.. Microchip capillary electrophoresis: application to peptide analysis. Methods in Molecular Biology (Totowa, NJ, United States) (2006), 339(Microchip Capillary Electrophoresis), 159-186.
Huynh, Bryan H.; Fogarty, Barbara A.; Nandi, Pradyot; Lunte, Susan M.. A microchip electrophoresis device with on-line microdialysis sampling and on-chip sample derivatization by naphthalene 2,3-dicarboxaldehyde/2-mercaptoethanol for amino acid and peptide analysis. Journal of Pharmaceutical and Biomedical Analysis (2006), 42(5), 529-534.
Petitto, S. C.; Berrie, C. L.; Langell, M. A. Novel mesoscale defect structure on NiO(100) surfaces by atomic force microscopy. Surface Science (2006), 600(17), L229-L235.
Takaoka, Hiroki; Moriyama, Kenji; Yamamoto, Miho; Yasuzawa, Mikito; Imai, Shinji; Gifford, Raeann; Wilson, George S.. Preparation of in vivo measurement type biosensor using super-flexible alloy wire as the core material. Chemical Sensors (2006), 22(Suppl. B), 7-9.
Gifford, Raeann; Kehoe, Joseph J.; Barnes, Sandra L.; Kornilayev, Boris A.; Alterman, Michail A.; Wilson, George S.. Protein interactions with subcutaneously implanted biosensors. Biomaterials (2006), 27(12), 2587-2598.
Erickson, Elizabeth S.; Mooren, Olivia L.; Moore, David; Krogmeier, Jeffrey R.; Dunn, Robert C.. The role of nuclear envelope calcium in modifying nuclear pore complex structure. Canadian Journal of Physiology and Pharmacology (2006), 84(3/4), 309-318.
Weis, David D.; Engen, John R.; Kass, Ignatius J. Semi-automated data processing of hydrogen exchange mass spectra using HX-Express. Journal of the American Society for Mass Spectrometry (2006), 17(12), 1700-1703.
Frankenfeld, Celeste N.; Rosenbaugh, Matt R.; Fogarty, Barbara A.; Lunte, Susan M.. Separation and detection of peroxynitrite and its metabolites by capillary electrophoresis with UV detection. Journal of Chromatography, A (2006), 1111(2), 147-152.
Bandu, Mary L.; Desaire, Heather. The STEP method (statistical test of equivalent pathways): application to pharmaceuticals. Analyst (2006), 131(2), 268-274.
Samra, Hardeep S.; Gao, Fei; He, Feng; Hoang, Etter; Chen, Zugen; Gegenheimer, Peter A.; Berrie, Cindy L.; Richter, Mark L. Structural Analysis of the Regulatory Dithiol-containing Domain of the Chloroplast ATP Synthase Subunit. Journal of Biological Chemistry (2006), 281(41), 31041-31049.
Jay R. Unruh, E. Shane Price, Roque Gagliano Molla, Lisa Stehno-Bittel, Carey K. Johnson, Rongqing Hui, Two-Photon Microscopy with Wavelength Switchable Fiber Laser Excitation, Optics Express (2006) 14, 9825-9831.
